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Indranil Sinha

Indranil Sinha

Bioinformatician

Department and organisational affiliation:

About me

I have received my PhD at Karolinska Institute in the field of Epigenetics and Bioinformatics under the supervision of Professor Karl Ekwall. I have started my postdoctoral work at Karolinska Institute, Dept. of molecular Biochemistry and Biophysics where I was involved in analyzing high-throughput sequencing data such as RNAseq, miRNA and Single-cell RNA sequencing.

In 2012 I have started another post-doctoral work at the Department of Biosciences and Nutrition in the "Estrogen signaling research group" headed by Professor Karin Dahlman-Wright. From 2014 I am working as a Senior Researcher in the same group. I am working in close collaboration with the Karolinska Institute core facility for Bioinformatics and Expression Analysis (BEA, www.bea.ki.se).

Research description

My present research focus is on the epigenetic mechanisms in the development of Type 2 Diabetes.

 

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Teaching portfolio

  • Involved in teaching for a Bachelors course (2016 - 2020) titled “Genetics, genomics and functional genomics”.
  • Organized a course for PhD students and post-docs at Karolinska Institutet, titled “A combination of in vivo and in silico methods to determine genome-wide protein targets” in 2014. (http://kiwas.ki.se/katalog/katalog/kurs/1757)
  • Worked as a teaching assistant (part time) in Södertörns Högskola, Huddinge, Sweden (2004 - 2010). The job responsibility was to design and teach Bioinformatics and proteomics for master’s level courses.
  • Co-supervised a PhD student who graduated recently as well as co-supervised several masters’ students.

Education

PhD in Cell & Molecular Biology with specialization in Epigenetics and Bioinformatics, Department of Biosciences and Nutrition, Karolinska Institutet, Sweden. Dissertation Title: Genome-wide patterns of histone modifications in fission yeast (http://diss.kib.ki.se/2010/978-91-7409-747-4/).

M.Sc. in Analytical Chemistry from Calcutta University, India.

Academic honours, awards and prizes

Novo Nordisk Foundation conference grant and Karolinska Institutet travel grant for “Copenhagen Bioscience Conference: Metabolism in Action - lifetime influence of genes and environment” in October 2017.

International Conference on Biotechnology & Bioinformatics (ICBB-2014) “Young Investigator Award” in February 2014. 

100,000 SEK from Postgraduate program in Developmental Biology and Cellular Signaling (DECS) for running a course for PhD students Titled “A combination of in vivo and in silico methods to determine genome-wide protein targets” at Karolinska Institutet in the year 2013.

The prestigious Strategic Research Programme in Diabetes (SRP) post-doctoral research fellowship in 2012.

A travel award from The Chromatin Plasticity Network to attend Computational and Statistical Aspects of MicroArray Analysis (CSAMA08) June 15-20, 2008 in Bressanone, Italy.

Södertörns högskola (Södertörn University College) PhD Study grant to perform the PhD study at Karolinska Institutet from 2005-2010.

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