Julia Hauenstein

About me
Publications
Public outreach and news

About me

After obtaining my Master's degree in Life Sciences and Technologies from
EPFL in Switzerland, I started my PhD in Robert Månsson's group in 2019. My
main research focus lies on the bioinformatic analysis of genomic,
transcriptomic, and epigenomic (ATACseq/ChIPseq) data in normal and malignant
hematopoiesis, particularly focusing on multiple myeloma.

Articles

Article: BMC GENOMICS. 2023;24(1):205

T-RHEX-RNAseq - a tagmentation-based, rRNA blocked, random hexamer primed RNAseq method for generating stranded RNAseq libraries directly from very low numbers of lysed cells.

Gustafsson C; Hauenstein J; Frengen N; Krstic A; Luc S; Månsson R
Article: BLOOD ADVANCES. 2022;6(17):5009-5023

Linked-read whole-genome sequencing resolves common and private structural variants in multiple myeloma.

Peña-Pérez L; Frengen N; Hauenstein J; Gran C; Gustafsson C; Eisfeldt J; Kierczak M; Taborsak-Lines F; Olsen R-A; Wallblom A; Krstic A; Ewels P; Lindstrand A; Månsson R
Article: STEM CELL REPORTS. 2022;17(7):1546-1560

CD49b identifies functionally and epigenetically distinct subsets of lineage-biased hematopoietic stem cells.

Somuncular E; Hauenstein J; Khalkar P; Johansson A-S; Dumral Ö; Frengen NS; Gustafsson C; Mocci G; Su T-Y; Brouwer H; Trautmann CL; Vanlandewijck M; Orkin SH; Månsson R; Luc S
Article: FRONTIERS IN IMMUNOLOGY. 2022;13:880668

FOXO Dictates Initiation of B Cell Development and Myeloid Restriction in Common Lymphoid Progenitors.

Peña-Pérez L; Kharazi S; Frengen N; Krstic A; Bouderlique T; Hauenstein J; He M; Somuncular E; Li Wang X; Dahlberg C; Gustafsson C; Johansson A-S; Walfridsson J; Kadri N; Woll P; Kierczak M; Qian H; Westerberg L; Luc S; Månsson R
Article: AMERICAN JOURNAL OF HEMATOLOGY. 2021;96(8):925-933

Low dose venetoclax as a single agent treatment of plasma cell malignancies harboring t(11;14).

Nahi H; Kashif M; Klimkowska M; Karvouni M; Wallblom A; Gran C; Hauenstein J; Frengen N; Gustafsson C; Afram G; Uttervall K; Lund J; Månsson R; Wagner AK; Alici E
Journal article: EXPERIMENTAL HEMATOLOGY. 2021;100:s103

3126 – HEMATOPOIETIC STEM CELLS WITH LYMPHOID BIAS ARE MARKED BY CD49B

Somuncular E; Hauenstein J; Khalkar P; Dumral Ö; Johansson A-S; Mocci G; Gustafsson C; Frengen N; Su T-Y; Trautmann C; Brouwer H; Vanlandewijck M; Orkin SH; Månsson R; Luc S

All other publications

Preprint: BIORXIV. 2023

Aging is associated with functional and molecular changes in distinct hematopoietic stem cell subsets

Somuncular E; Hauenstein J; Su T-Y; Dumral Ö; Gustafsson C; Tzortzis E; Forlani A; Johansson A-S; Månsson R; Luc S
Preprint: BIORXIV. 2022

T-RHEX-RNAseq – A tagmentation-based, rRNA blocked, random hexamer primed RNAseq method for generating stranded RNAseq libraries directly from very low numbers of lysed cells

Gustafsson C; Hauenstein J; Frengen N; Krstic A; Luc S; Månsson R
Preprint: BIORXIV. 2022

FOXO dictate initiation of B cell development and myeloid restriction in common lymphoid progenitors

Peña-Pérez L; Kharazi S; Frengen N; Krstic A; Bouderlique T; Hauenstein J; He M; Somuncular E; Wang XL; Dahlberg C; Gustafsson C; Johansson A-S; Walfridsson J; Kadri N; Woll P; Kierczak M; Qian H; Westerberg L; Luc S; Månsson R
Preprint: BIORXIV. 2021

Linked-read whole-genome sequencing resolves common and private structural variants in multiple myeloma

Peña-Pérez L; Frengen N; Hauenstein J; Gran C; Gustafsson C; Eisfeldt J; Kierczak M; Taborsak-Lines F; Olsen R-A; Wallblom A; Krstic A; Ewels P; Lindstrand A; Månsson R
Conference publication: EXPERIMENTAL HEMATOLOGY. 2021;100:S103

HEMATOPOIETIC STEM CELLS WITH LYMPHOID BIAS ARE MARKED BY CD49B

Somuncular E; Hauenstein J; Khalkar P; Dumral Ö; Johansson A-S; Mocci G; Gustafsson C; Frengen N; Su T-Y; Trautmann C; Brouwer H; Vanlandewijck M; Orkin SH; Mansson R; Luc S
Conference publication: EUROPEAN JOURNAL OF HUMAN GENETICS. 2020;28(SUPPL 1):605-606

Phased WGS by direct library preparation from 240 FACS sorted cells for comprehensive genetics in multiple myeloma

Gran C; Pena-Perez L; Eisfeldt J; Gustafsson C; Bruchfeld JB; Hauenstein J; Frengen N; Taborsak-Lines F; Olsen R; Ewels P; Lindstrand A; Nahi H; Mansson R

About me

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