Matthew Kirkham

Publications
Grants
Public outreach and news

Articles

Article: JOURNAL OF NEUROSCIENCE METHODS. 2021;348:109002

CUBIC-f: An optimized clearing method for cell tracing and evaluation of neurite density in the salamander brain.

Pinheiro T; Mayor I; Edwards S; Joven A; Kantzer CG; Kirkham M; Simon A
Article: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2018;499(2):136-142

Reprint of: A chemical screen identifies trifluoperazine as an inhibitor of glioblastoma growth.

Pinheiro T; Otrocka M; Seashore-Ludlow B; Rraklli V; Holmberg J; Forsberg-Nilsson K; Simon A; Kirkham M
Article: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2017;494(3-4):477-483

A chemical screen identifies trifluoperazine as an inhibitor of glioblastoma growth.

Pinheiro T; Otrocka M; Seashore-Ludlow B; Rraklli V; Holmberg J; Forsberg-Nilsson K; Simon A; Kirkham M
Article: METHODS IN MOLECULAR BIOLOGY. 2015;1290:91-99

Studying newt brain regeneration following subtype specific neuronal ablation.

Kirkham M; Joven A
Article: METHODS IN MOLECULAR BIOLOGY. 2015;1290:47-70

Husbandry of Spanish ribbed newts (Pleurodeles waltl).

Joven A; Kirkham M; Simon A
Article: STEM CELL REPORTS. 2014;2(4):507-519

Progenitor cell dynamics in the Newt Telencephalon during homeostasis and neuronal regeneration.

Kirkham M; Hameed LS; Berg DA; Wang H; Simon A
Article: EXPERIMENTAL CELL RESEARCH. 2013;319(8):1187-1197

A reference transcriptome and inferred proteome for the salamander Notophthalmus viridescens.

Abdullayev I; Kirkham M; Björklund ÅK; Simon A; Sandberg R
Article: NEUROSCIENCE LETTERS. 2011;497(1):11-16

Microglia activation during neuroregeneration in the adult vertebrate brain.

Kirkham M; Berg DA; Simon A
Article: CELL STEM CELL. 2011;8(4):426-433

Dopamine controls neurogenesis in the adult salamander midbrain in homeostasis and during regeneration of dopamine neurons.

Berg DA; Kirkham M; Wang H; Frisén J; Simon A
Journal article: DEVELOPMENT. 2011;138(1):180

Efficient regeneration by activation of neurogenesis in homeostatically quiescent regions of the adult vertebrate brain

Berg DA; Kirkham M; Beljajeva A; Knapp D; Habermann B; Ryge J; Tanaka EM; Simon A
Article: DEVELOPMENT. 2010;137(24):4127-4134

Efficient regeneration by activation of neurogenesis in homeostatically quiescent regions of the adult vertebrate brain.

Berg DA; Kirkham M; Beljajeva A; Knapp D; Habermann B; Ryge J; Tanaka EM; Simon A
Article: JOURNAL OF CELL BIOLOGY. 2010;190(4):675-691

Clathrin-independent carriers form a high capacity endocytic sorting system at the leading edge of migrating cells.

Howes MT; Kirkham M; Riches J; Cortese K; Walser PJ; Simpson F; Hill MM; Jones A; Lundmark R; Lindsay MR; Hernandez-Deviez DJ; Hadzic G; McCluskey A; Bashir R; Liu L; Pilch P; McMahon H; Robinson PJ; Hancock JF; Mayor S; Parton RG
Journal article: JOURNAL OF PROTEOMICS AND BIOINFORMATICS. 2008;S2(01):105

PTRF-Cavin is Essential for Caveola Formation - From Proteomics to Function

Hill MM; Luetterforst R; Kirkham A; Kirkham M; Jones A; Hancock JF; Parton RG
Article: JOURNAL OF CELL SCIENCE. 2008;121(Pt 12):2075-2086

Evolutionary analysis and molecular dissection of caveola biogenesis.

Kirkham M; Nixon SJ; Howes MT; Abi-Rached L; Wakeham DE; Hanzal-Bayer M; Ferguson C; Hill MM; Fernandez-Rojo M; Brown DA; Hancock JF; Brodsky FM; Parton RG
Article: CELL. 2008;132(1):113-124

PTRF-Cavin, a conserved cytoplasmic protein required for caveola formation and function.

Hill MM; Bastiani M; Luetterforst R; Kirkham M; Kirkham A; Nixon SJ; Walser P; Abankwa D; Oorschot VMJ; Martin S; Hancock JF; Parton RG
Journal article: SEIBUTSU BUTSURI. 2006;46(supplement2):s108

S1e1-1 Evolutionary analysis and molecular dissection of caveolae biogenesis(S1-e1: "Unraveling the membrane microdomains using new biophysical tools",Symposia,Abstract,Meeting Program of EABS & BSJ 2006)

Parton RG; Kirkham M; Nixon SJ; Hancock JF; Howes M
Journal article: BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. 2005;1746(3):349

Erratum to “Clathrin-independent endocytosis: New insights into caveolae and non-caveolar lipid raft carriers” [Biochim. Biophys. Acta 1744 (2005) 273–286]

Kirkham M; Parton RG
Article: JOURNAL OF CELL BIOLOGY. 2005;168(3):465-476

Ultrastructural identification of uncoated caveolin-independent early endocytic vehicles.

Kirkham M; Fujita A; Chadda R; Nixon SJ; Kurzchalia TV; Sharma DK; Pagano RE; Hancock JF; Mayor S; Parton RG
Article: CELL. 2003;112(4):575-587

SAS-4 is a C. elegans centriolar protein that controls centrosome size.

Kirkham M; Müller-Reichert T; Oegema K; Grill S; Hyman AA
Article: JOURNAL OF CELL BIOLOGY. 2002;157(4):591-602

The kinetically dominant assembly pathway for centrosomal asters in Caenorhabditis elegans is gamma-tubulin dependent.

Hannak E; Oegema K; Kirkham M; Gönczy P; Habermann B; Hyman AA
Article: JOURNAL OF CELL BIOLOGY. 2001;155(7):1109-1115

Aurora-A kinase is required for centrosome maturation in Caenorhabditis elegans.

Hannak E; Kirkham M; Hyman AA; Oegema K
Article: DEVELOPMENTAL CELL. 2001;1(3):363-375

zyg-8, a gene required for spindle positioning in C. elegans, encodes a doublecortin-related kinase that promotes microtubule assembly.

Gönczy P; Bellanger JM; Kirkham M; Pozniakowski A; Baumer K; Phillips JB; Hyman AA
Article: JOURNAL OF CELL BIOLOGY. 2001;153(6):1209-1225

Functional analysis of kinetochore assembly in Caenorhabditis elegans.

Oegema K; Desai A; Rybina S; Kirkham M; Hyman AA
Article: NATURE. 2000;408(6810):331-336

Functional genomic analysis of cell division in C. elegans using RNAi of genes on chromosome III.

Gönczy P; Echeverri C; Oegema K; Coulson A; Jones SJ; Copley RR; Duperon J; Oegema J; Brehm M; Cassin E; Hannak E; Kirkham M; Pichler S; Flohrs K; Goessen A; Leidel S; Alleaume AM; Martin C; Ozlü N; Bork P; Hyman AA
Article: JOURNAL OF CELL BIOLOGY. 1999;147(1):135-150

Cytoplasmic dynein is required for distinct aspects of MTOC positioning, including centrosome separation, in the one cell stage Caenorhabditis elegans embryo.

Gönczy P; Pichler S; Kirkham M; Hyman AA
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Review: SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY. 2009;20(6):691-696

Not lost in translation Sensing the loss and filling the gap during regeneration.

Simon A; Berg D; Kirkham M
Corrigendum: BIOCHIMICA ET BIOPHYSICA ACTA: INTERNATIONAL JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 2005;1746(3):349-363

Clathrin-independent endocytosis: new insights into caveolae and non-caveolar lipid raft carriers.

Kirkham M; Parton RG
Review: BIOCHIMICA ET BIOPHYSICA ACTA: INTERNATIONAL JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 2005;1745(3):273-286

Clathrin-independent endocytosis: new insights into caveolae and non-caveolar lipid raft carriers.

Kirkham M; Parton RG
Conference publication: CELL MOTILITY AND THE CYTOSKELETON. 2003;54(2):183

DCD-1 is a novel centriole component whose amount determines the extent of PCM recruitment

Kirkham M; Müller-Reichert T; Oegema K; Rybina S; Hyman A
Published conference paper: NOVARTIS FOUNDATION SYMPOSIUM. 2001;237:164-181

Spindle positioning during the asymmetric first cell division of Caenorhabditis elegans embryos.

Gönczy P; Grill S; Stelzer EH; Kirkham M; Hyman AA
Conference publication: MOLECULAR BIOLOGY OF THE CELL. 2001;12:439A

Pericentriolar material accumulates asymmetrically at duplicated centrosomes in dcd-1(RNAi) embryos

Kirkham M; Rybina S; Mueller-Reichert T; Hyman AA

Grants

Refining methods in salamander research

Swedish Research Council

1 January 2018 - 31 December 2021
Microglia/Macroglia interface during brain regeneration ? a comparative approach

Swedish Research Council

1 January 2014 - 31 December 2018
Dopaminergic neurogenesis and functional recovery in a salamander model of Parkinson s disease

International Human Frontier Science Program Organization

1 May 2007 - 30 April 2010
Dopaminergic neurogenesis and functional recovery in a salamander model of Parkinson’s disease

International Human Frontier Science Program Organization

1 May 2007 - 30 April 2010

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