Oscar Bedoya Reina

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Articles

Article: JCI INSIGHT. 2024;9(6):e173337

Single-cell analyses of metastatic bone marrow in human neuroblastoma reveals microenvironmental remodeling and metastatic signature.

Mei S; Alchahin AM; Embaie BT; Gavriliuc IM; Verhoeven BM; Zhao T; Li X; Jeffries NE; Pepich A; Sarkar H; Olsen TK; Wickström M; Stenman J; Reina-Bedoya O; Kharchenko PV; Saylor PJ; Johnsen JI; Sykes DB; Kogner P; Baryawno N
Article: CANCERS. 2023;15(18):4599

Target Genes of c-MYC and MYCN with Prognostic Power in Neuroblastoma Exhibit Different Expressions during Sympathoadrenal Development.

Yuan Y; Alzrigat M; Rodriguez-Garcia A; Wang X; Bexelius TS; Johnsen JI; Arsenian-Henriksson M; Liaño-Pons J; Bedoya-Reina OC
Article: CELL DEATH DISCOVERY. 2022;8(1):464

Proof-of-principle studies on a strategy to enhance nucleotide imbalance specifically in cancer cells.

Alkasalias T; Zhang J; Madapura H; Dalarun B; Reina OB; Lewensohn R; Viktorsson K; Salihi A; Darekar S; Laín S
Article: JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH. 2022;41(1):226

Expression and activation of nuclear hormone receptors result in neuronal differentiation and favorable prognosis in neuroblastoma.

Sainero-Alcolado L; Mushtaq M; Liaño-Pons J; Rodriguez-Garcia A; Yuan Y; Liu T; Ruiz-Pérez MV; Schlisio S; Bedoya-Reina O; Arsenian-Henriksson M
Article: NATURE METABOLISM. 2022;4(6):739-758

Impaired oxygen-sensitive regulation of mitochondrial biogenesis within the von Hippel-Lindau syndrome.

Li S; Li W; Yuan J; Bullova P; Wu J; Zhang X; Liu Y; Plescher M; Rodriguez J; Bedoya-Reina OC; Jannig PR; Valente-Silva P; Yu M; Henriksson MA; Zubarev RA; Smed-Sörensen A; Suzuki CK; Ruas JL; Holmberg J; Larsson C; Christofer Juhlin C; von Kriegsheim A; Cao Y; Schlisio S
Article: NATURE COMMUNICATIONS. 2021;12(1):5309

Single-nuclei transcriptomes from human adrenal gland reveal distinct cellular identities of low and high-risk neuroblastoma tumors.

Bedoya-Reina OC; Li W; Arceo M; Plescher M; Bullova P; Pui H; Kaucka M; Kharchenko P; Martinsson T; Holmberg J; Adameyko I; Deng Q; Larsson C; Juhlin CC; Kogner P; Schlisio S
Article: NUCLEIC ACIDS RESEARCH. 2021;49(5):2509-2521

Aberrant splicing in neuroblastoma generates RNA-fusion transcripts and provides vulnerability to spliceosome inhibitors.

Shi Y; Yuan J; Rraklli V; Maxymovitz E; Cipullo M; Liu M; Li S; Westerlund I; Bedoya-Reina OC; Bullova P; Rorbach J; Juhlin CC; Stenman A; Larsson C; Kogner P; O'Sullivan MJ; Schlisio S; Holmberg J
Article: G3-GENES GENOMES GENETICS. 2019;9(5):1633-1646

Genomic Variants Among Threatened Acropora Corals.

Kitchen SA; Ratan A; Bedoya-Reina OC; Burhans R; Fogarty ND; Miller W; Baums IB
Article: ELIFE. 2019;8:e45051

The long non-coding RNA Cerox1 is a post transcriptional regulator of mitochondrial complex I catalytic activity.

Sirey TM; Roberts K; Haerty W; Bedoya-Reina O; Rogatti-Granados S; Tan JY; Li N; Heather LC; Carter RN; Cooper S; Finch AJ; Wills J; Morton NM; Marques AC; Ponting CP
Article: BMC GENOMICS. 2017;18(1):207

Unity in defence: honeybee workers exhibit conserved molecular responses to diverse pathogens.

Doublet V; Poeschl Y; Gogol-Döring A; Alaux C; Annoscia D; Aurori C; Barribeau SM; Bedoya-Reina OC; Brown MJF; Bull JC; Flenniken ML; Galbraith DA; Genersch E; Gisder S; Grosse I; Holt HL; Hultmark D; Lattorff HMG; Le Conte Y; Manfredini F; McMahon DP; Moritz RFA; Nazzi F; Niño EL; Nowick K; van Rij RP; Paxton RJ; Grozinger CM
Article: NATURE COMMUNICATIONS. 2016;7:11519

Giraffe genome sequence reveals clues to its unique morphology and physiology.

Agaba M; Ishengoma E; Miller WC; McGrath BC; Hudson CN; Bedoya Reina OC; Ratan A; Burhans R; Chikhi R; Medvedev P; Praul CA; Wu-Cavener L; Wood B; Robertson H; Penfold L; Cavener DR
Article: CELL REPORTS. 2015;12(2):217-228

Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic.

Lynch VJ; Bedoya-Reina OC; Ratan A; Sulak M; Drautz-Moses DI; Perry GH; Miller W; Schuster SC
Article: BMC GENOMICS. 2015;16(1):518

Genome-wide analysis of signatures of selection in populations of African honey bees (Apis mellifera) using new web-based tools.

Fuller ZL; Niño EL; Patch HM; Bedoya-Reina OC; Baumgarten T; Muli E; Mumoki F; Ratan A; McGraw J; Frazier M; Masiga D; Schuster S; Grozinger CM; Miller W
Article: GENOME BIOLOGY AND EVOLUTION. 2014;6(2):433-450

Polar bears exhibit genome-wide signatures of bioenergetic adaptation to life in the arctic environment.

Welch AJ; Bedoya-Reina OC; Carretero-Paulet L; Miller W; Rode KD; Lindqvist C
Article: GIGASCIENCE. 2013;2(1):17

Galaxy tools to study genome diversity.

Bedoya-Reina OC; Ratan A; Burhans R; Kim HL; Giardine B; Riemer C; Li Q; Olson TL; Loughran TP; Vonholdt BM; Perry GH; Schuster SC; Miller W
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2013;110(15):5823-5828

Aye-aye population genomic analyses highlight an important center of endemism in northern Madagascar.

Perry GH; Louis EE; Ratan A; Bedoya-Reina OC; Burhans RC; Lei R; Johnson SE; Schuster SC; Miller W
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2012;109(36):E2382-E2390

Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change.

Miller W; Schuster SC; Welch AJ; Ratan A; Bedoya-Reina OC; Zhao F; Kim HL; Burhans RC; Drautz DI; Wittekindt NE; Tomsho LP; Ibarra-Laclette E; Herrera-Estrella L; Peacock E; Farley S; Sage GK; Rode K; Obbard M; Montiel R; Bachmann L; Ingólfsson O; Aars J; Mailund T; Wiig O; Talbot SL; Lindqvist C
Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2011;108(30):12348-12353

Genetic diversity and population structure of the endangered marsupial Sarcophilus harrisii (Tasmanian devil).

Miller W; Hayes VM; Ratan A; Petersen DC; Wittekindt NE; Miller J; Walenz B; Knight J; Qi J; Zhao F; Wang Q; Bedoya-Reina OC; Katiyar N; Tomsho LP; Kasson LM; Hardie R-A; Woodbridge P; Tindall EA; Bertelsen MF; Dixon D; Pyecroft S; Helgen KM; Lesk AM; Pringle TH; Patterson N; Zhang Y; Kreiss A; Woods GM; Jones ME; Schuster SC
Article: INTERNATIONAL BIODETERIORATION & BIODEGRADATION. 2011;65(1):147-152

Horizontal arsC gene transfer among microorganisms isolated from arsenic polluted soil

Villegas-Torres MF; Bedoya-Reina OC; Salazar C; Vives-Florez MJ; Dussan J
Article: GENE. 2010;458(1-2):27-36

Preliminary assessment of COSII gene diversity in lulo and a relative species: initial identification of genes potentially associated with domestication.

Bedoya-Reina OC; Barrero LS

All other publications

Corrigendum: CELL DEATH DISCOVERY. 2022;8(1):472

Correction: Proof-of-principle studies on a strategy to enhance nucleotide imbalance specifically in cancer cells.

Alkasalias T; Zhang J; Madapura H; Dalarun B; Reina OB; Lewensohn R; Viktorsson K; Salihi A; Darekar S; Laín S
Corrigendum: NATURE METABOLISM. 2022;4(10):1421

Publisher Correction: Impaired oxygen-sensitive regulation of mitochondrial biogenesis within the von Hippel-Lindau syndrome.

Li S; Li W; Yuan J; Bullova P; Wu J; Zhang X; Liu Y; Plescher M; Rodriguez J; Bedoya-Reina OC; Jannig PR; Valente-Silva P; Yu M; Henriksson MA; Zubarev RA; Smed-Sörensen A; Suzuki CK; Ruas JL; Holmberg J; Larsson C; Christofer Juhlin C; von Kriegsheim A; Cao Y; Schlisio S
Letter: CANCER CELL. 2021;39(2):134-135

Chromaffin Cells with Sympathoblast Signature: Too Similar to Keep Apart?

Bedoya-Reina OC; Schlisio S
Corrigendum: BMC GENOMICS. 2017;18(1):256

Erratum to: Unity in defence: honeybee workers exhibit conserved molecular responses to diverse pathogens.

Doublet V; Poeschl Y; Gogol-Döring A; Alaux C; Annoscia D; Aurori C; Barribeau SM; Bedoya-Reina OC; Brown MJF; Bull JC; Flenniken ML; Galbraith DA; Genersch E; Gisder S; Grosse I; Holt HL; Hultmark D; Lattorff HMG; Le Conte Y; Manfredini F; McMahon DP; Moritz RFA; Nazzi F; Niño EL; Nowick K; van Rij RP; Paxton RJ; Grozinger CM
Editorial comment: NATURE STRUCTURAL & MOLECULAR BIOLOGY. 2017;24(1):7-8

Functional RNA classes: a matter of time?

Bedoya-Reina OC; Ponting CP

Employments

Assistant Professor, Department of Women's and Children's Health, Karolinska Institutet, 2023-2024
Assistant Professor, Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 2020-2023

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