Shayan Mostafaei
Bioinformatician
E-mail: shayan.mostafaei@ki.se
Telephone: +46852482235
Visiting address: ,
Postal address: C8 Medicinsk epidemiologi och biostatistik, C8 MEB II Hägg, 171 77 Stockholm
About me
- I'm a bioinformatician and my research interests are application of advanced statistical methods, Bayesian inference, causal inference, longitudinal, time-to-event and machine learning algorithms in computational biology, health, and medicine. I'm also interested in the statistical genetics and analyzing OMICs and longitudinal data from national registry and surveys.Education: * PhD in Biostatistics and Bioinformatics, Tehran University of Medical Sciences, Tehran, Iran, 2018.Postdocs* Postdoc in Machine Learning, School of Electrical Engineering and Computer Science, Department of Intelligent Systems, Division of Information Science and Engineering, Royal Institute of Technology (KTH), Stockholm, Sweden, 2022.** Postdoc in Dementia and Machine Learning, Division of Clinical Geriatrics, Department of Neurobiology, Care Sciences, and Society, Karolinska Institutet, Stockholm, Sweden, 2023.
Research
- Advanced Clustering, Regression and Classification AlgorithmsStatistical Learning for OMICs data Bioinformatics and Statistical GeneticsLongitudinal Statistical Models for high-dimensional dataSurvival and Risk ModellingBayesian and Network Meta-analysis for GWASBiological Aging
Articles
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Article: ALZHEIMERS RESEARCH & THERAPY. 2023;15(1):220
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Article: EUROPEAN JOURNAL OF NUCLEAR MEDICINE AND MOLECULAR IMAGING. 2023;51(1):40-53
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Journal article: ALZHEIMERS & DEMENTIA. 2023;19(S22)
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Journal article: CLINICAL NUCLEAR MEDICINE. 2023;48(12):1035-1046
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Journal article: HEALTH SCIENCE REPORTS. 2023;6(12):e1746
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Journal article: ALZHEIMERS & DEMENTIA. 2023;19(S24)
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Journal article: ALZHEIMERS & DEMENTIA. 2023;19(S21)
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Journal article: ACTA BIOCHIMICA IRANICA. 2023
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Article: JAPANESE JOURNAL OF RADIOLOGY. 2023;41(11):1265-1274
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Article: JAMA NETWORK OPEN. 2023;6(10):e2338080
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Article: MOLECULAR BIOLOGY REPORTS. 2023;50(10):8201-8212
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Article: JOURNAL OF THE AMERICAN MEDICAL DIRECTORS ASSOCIATION. 2023;24(9):1381-1388
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Journal article: NUTRITION JOURNAL. 2023;22(1):35
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Article: BMC MEDICAL RESEARCH METHODOLOGY. 2023;23(1):161
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Article: SCIENTIFIC REPORTS. 2023;13(1):9480
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Article: ULTRASOUND IN OBSTETRICS & GYNECOLOGY. 2023;61(4):511-517
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Article: CELL JOURNAL. 2023;25(3):203-211
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Article: IRANIAN JOURNAL OF ALLERGY ASTHMA AND IMMUNOLOGY. 2023;22(1):25-33
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Journal article: COPD-JOURNAL OF CHRONIC OBSTRUCTIVE PULMONARY DISEASE. 2022;19(1):290-299
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Journal article: JOURNAL OF MATERNAL-FETAL & NEONATAL MEDICINE. 2022;35(25):6600-6609
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Journal article: JOURNAL OF MATERNAL-FETAL & NEONATAL MEDICINE. 2022;35(25):4884-4888
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Article: EUROPEAN JOURNAL OF OBSTETRICS & GYNECOLOGY AND REPRODUCTIVE BIOLOGY. 2022;279:45-49
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Article: JOURNAL OF DIGITAL IMAGING. 2022;35(6):1708-1718
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Article: SCIENTIFIC REPORTS. 2022;12(1):14817
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Journal article: IRANIAN JOURNAL OF MEDICAL MICROBIOLOGY. 2022;16(5):420-429
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Journal article: JOURNAL OF TEXTURE STUDIES. 2022;53(5):601-608
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Article: NUTRITION JOURNAL. 2022;21(1):53
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Journal article: CLINICAL AND EXPERIMENTAL MEDICINE. 2022;22(3):427-438
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Journal article: BMC EMERGENCY MEDICINE. 2022;22(1):130
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Journal article: ARCHIVES OF DISEASE IN CHILDHOOD-FETAL AND NEONATAL EDITION. 2022;107(4):371-379
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Article: COMPUTERS IN BIOLOGY AND MEDICINE. 2022;145:105467
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Article: ULTRASOUND IN OBSTETRICS & GYNECOLOGY. 2022;59(4):506-512
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Article: CLINICAL RHEUMATOLOGY. 2022;41(4):1177-1183
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Journal article: MAJALLAH-I PIZISHKI-I URUMIYYAH. 2022;32(11):824-830
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Journal article: AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE. 2022;205(5):550-562
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Journal article: BREAST CANCER. 2022;29(2):260-273
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Article: BMC PULMONARY MEDICINE. 2022;22(1):60
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Article: INFLAMMOPHARMACOLOGY. 2022;30(1):199-205
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Journal article: PRENATAL DIAGNOSIS. 2021;41(12):1524-1530
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Journal article: PRENATAL DIAGNOSIS. 2021;41(12):1582-1588
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Journal article: BMC RHEUMATOLOGY. 2021;5(1):34
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Journal article: JOURNAL OF DIGITAL IMAGING. 2021;34(5):1086-1098
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Journal article: NUTRITION AND CANCER-AN INTERNATIONAL JOURNAL. 2021;73(8):1539-1540
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Journal article: COMPUTERS IN BIOLOGY AND MEDICINE. 2021;136:104752
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Journal article: ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH. 2021;28(32):43064-43073
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Journal article: IRANIAN JOURNAL OF ALLERGY ASTHMA AND IMMUNOLOGY. 2021;20(3):338-349
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Journal article: GENE REPORTS. 2021;23:101080
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Journal article: BMC BIOINFORMATICS. 2021;22(1):154
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Journal article: MSPHERE. 2021;6(1):e00076-e00021
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Journal article: RESPIRATORY RESEARCH. 2021;22(1):53
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Journal article: THERAPEUTIC APHERESIS AND DIALYSIS. 2021;25(1):4-15
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Journal article: CURRENT HIV RESEARCH. 2021;19(1):27-34
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Journal article: BMC INFECTIOUS DISEASES. 2021;21(1):2
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Journal article: EATING AND WEIGHT DISORDERS-STUDIES ON ANOREXIA BULIMIA AND OBESITY. 2020;25(6):1561-1571
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Journal article: INTERNATIONAL IMMUNOPHARMACOLOGY. 2020;89(Pt B):107081
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Journal article: EUROPEAN RESPIRATORY JOURNAL. 2020;56(6):2002808
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Journal article: JOURNAL OF DIABETES AND METABOLIC DISORDERS. 2020;19(2):1777-1786
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Journal article: BREAST JOURNAL. 2020;26(11):2323-2326
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Journal article: INTERNATIONAL IMMUNOPHARMACOLOGY. 2020;88:106913
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Journal article: MICROBIAL PATHOGENESIS. 2020;147:104355
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Journal article: BMC CANCER. 2020;20(1):916
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Journal article: AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE. 2020;103(2):834-837
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Journal article: BMC MEDICAL GENETICS. 2020;21(1):147
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Journal article: SYSTEMS BIOLOGY IN REPRODUCTIVE MEDICINE. 2020;66(4):267-280
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Journal article: ASIAN PACIFIC JOURNAL OF CANCER PREVENTION. 2020;21(5):1431-1439
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Journal article: BMC CARDIOVASCULAR DISORDERS. 2020;20(1):193
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Journal article: REUMATISMO. 2020;72(1):44-51
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Journal article: PATHOLOGY RESEARCH AND PRACTICE. 2020;216(4):152855
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Journal article: INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH. 2020;17(6):E1981-1981
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Journal article: BMC NEPHROLOGY. 2020;21(1):30
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Journal article: ADVANCES IN RHEUMATOLOGY. 2020;60(1):8
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Journal article: DIABETES METABOLIC SYNDROME AND OBESITY-TARGETS AND THERAPY. 2020;13:879-887
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Journal article: PLOS ONE. 2020;15(2):e0227997
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Journal article: RADIOLOGIA MEDICA. 2020;125(1):87-97
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Journal article: BIOMEDICAL JOURNAL. 2019;42(6):403-410
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Journal article: META GENE. 2019;22:100613
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Journal article: MEDICAL JOURNAL OF THE ISLAMIC REPUBLIC OF IRAN. 2019
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Journal article: ASIA-PACIFIC JOURNAL OF CLINICAL ONCOLOGY. 2019;15(5):E59-E67
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Journal article: META GENE. 2019;21:100581
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Journal article: JOURNAL OF CELLULAR PHYSIOLOGY. 2019;234(10):17159-17171
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Journal article: BMC PSYCHIATRY. 2019;19(1):207
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Journal article: PHARMACOLOGICAL REPORTS. 2019;71(3):393-398
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Journal article: IRANIAN JOURNAL OF ALLERGY ASTHMA AND IMMUNOLOGY. 2019;18(2):173-181
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Journal article: JOURNAL OF CELLULAR PHYSIOLOGY. 2019;234(4):3790-3799
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Journal article: IRANIAN JOURNAL OF IMMUNOLOGY. 2019;16(1):71-83
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Journal article: MOLECULAR PHYLOGENETICS AND EVOLUTION. 2019;132:46-52
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Journal article: ADVANCES IN RHEUMATOLOGY. 2019;59(1):9
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Journal article: BMC MEDICAL GENETICS. 2019;20(1):24
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Journal article: BMC CANCER. 2019;19(1):61
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Journal article: IMMUNOPHARMACOLOGY AND IMMUNOTOXICOLOGY. 2019;41(1):95-101
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Journal article: MEDICAL PHYSICS. 2019;46(1):414
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Journal article: MEDICAL JOURNAL OF THE ISLAMIC REPUBLIC OF IRAN. 2019;33:137
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Journal article: SCIENTIFIC REPORTS. 2018;8(1):17612
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Journal article: SCIENTIFIC REPORTS. 2018;8(1):15775
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Journal article: INTERNATIONAL JOURNAL OF RHEUMATIC DISEASES. 2018;21(10):1746-1755
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Journal article: IMMUNOPHARMACOLOGY AND IMMUNOTOXICOLOGY. 2018;40(5):393-400
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Journal article: FUTURE VIROLOGY. 2018;13(9):637-645
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Journal article: INFLAMMATION RESEARCH. 2018;67(9):727-736
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Journal article: IMMUNOLOGICAL INVESTIGATIONS. 2018;47(6):632-642
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Journal article: IMMUNOPHARMACOLOGY AND IMMUNOTOXICOLOGY. 2018;40(4):297-302
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Journal article: INFLAMMOPHARMACOLOGY. 2018;26(3):737-745
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Journal article: JOURNAL OF COSMETIC DERMATOLOGY. 2018;17(3):549-554
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Journal article: META GENE. 2018;16:241-247
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Journal article: CLINICAL RESPIRATORY JOURNAL. 2018;12(5):1787-1801
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Journal article: CLINICAL ONCOLOGY. 2018;27(2):393-398
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Journal article: RHEUMATOLOGY INTERNATIONAL. 2018;38(3):489-498
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Journal article: TRANSFUSION AND APHERESIS SCIENCE. 2018;57(1):107-110
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Journal article: MICROBIAL PATHOGENESIS. 2018;115:189-193
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Journal article: RHEUMATOLOGY RESEARCH. 2018;3(1):35-40
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Journal article: PHYSICA MEDICA-EUROPEAN JOURNAL OF MEDICAL PHYSICS. 2018;45:192-197
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Journal article: CRESCENT JOURNAL OF MEDICAL AND BIOLOGICAL SCIENCES. 2018;5(1):14-20
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Journal article: MICROBIAL PATHOGENESIS. 2018;114:436-443
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Journal article: IRANIAN JOURNAL OF ALLERGY ASTHMA AND IMMUNOLOGY. 2017;16(6):471-479
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Journal article: MICROBIAL PATHOGENESIS. 2017;113:190-196
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Journal article: WOUND REPAIR AND REGENERATION. 2017;25(6):1002-1007
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Journal article: JOURNAL OF MEDICAL MICROBIOLOGY. 2017;66(11):1602-1606
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Journal article: INTERNATIONAL JOURNAL OF RHEUMATIC DISEASES. 2017;20(10):1551-1561
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Journal article: IRANIAN JOURNAL OF ALLERGY ASTHMA AND IMMUNOLOGY. 2017;16(5):418-424
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Journal article: MICROBIAL PATHOGENESIS. 2017;109:239-247
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Journal article: MICROBIAL PATHOGENESIS. 2017;109:8-14
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Journal article: FUTURE VIROLOGY. 2017;12(6):309-318
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Journal article: TUMOR BIOLOGY. 2017;39(6):1010428317703634-101042831770363
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Journal article: RHEUMATOLOGY RESEARCH. 2017;2(3):103-107
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Journal article: TRANSFUSION AND APHERESIS SCIENCE. 2017;56(2):226-232
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Journal article: TRANSFUSION AND APHERESIS SCIENCE. 2017;56(2):160-164
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Journal article: FUTURE VIROLOGY. 2017;12(4):227-236
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Journal article: HIV AND AIDS REVIEW. 2017;2:100-106
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Journal article: RHEUMATOLOGY RESEARCH. 2017;2(1):31-38
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Journal article: IRANIAN RED CRESCENT MEDICAL JOURNAL. 2017;19(4)
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Journal article: LUPUS. 2016;25(11):1244-1253
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Journal article: RHEUMATOLOGY RESEARCH. 2016;In Press(In Press)
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Journal article: IRANIAN JOURNAL OF PARASITOLOGY. 2015;10(4):632-637
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All other publications
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Letter: AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY. 2024;230(3):e1-e2
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Review: CURRENT PROBLEMS IN CARDIOLOGY. 2023;48(8):101198
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Review: PRENATAL DIAGNOSIS. 2023;43(9):1229-1238
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Preprint: 2023;Research Square
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Editorial comment: OBSTETRICAL & GYNECOLOGICAL SURVEY. 2023;78(3):131-132
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Preprint: 2023;Research Square
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Review: PRENATAL DIAGNOSIS. 2023;43(1):72-83
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Conference publication: 2022;00:1-3
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Review: AMERICAN JOURNAL OF OBSTETRICS AND GYNECOLOGY. 2022;227(3):430-439.e5
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Review: SYSTEMATIC REVIEWS. 2022;11(1):106
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Preprint: 2022;Research Square
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Preprint: 2021;Research Square
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Conference publication: 2021;00:1-3
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Conference publication: 2021;00:1-3
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Preprint: 2021;Research Square
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Preprint: 2021;Research Square
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Grants
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KI Research Foundation Grants 2022-20231 November 2022 - 1 November 2023
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Personalized medicine to slow cognitive decline in dementia patients using individualized prognostic deep learning: Studies from the Swedish dementia registryFoundation for Geriatric Diseases at KI 20221 October 2022
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Causal inference using Dynamic Bayesian Networks to find medications related to slow cognitive decline in dementia: Studies from the Swedish Dementia RegistryLoo and Hans Osterman Foundation 20221 July 2022 - 1 July 2023